GENA
CSIRO PLANT INDUSTRY
GENOMICS ARRAY DATABASE


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© Copyright 2001-2005 CSIRO Mathematical and Information Sciences
GENA Support: Gavin.Kennedy@csiro.au


Welcome


GENA Genomics Array Database

GENA is a relational database that manages microarray data as well as recording the experimental conditions.

A more detailed introduction can be found here.

Links and discussion documents

Published Data

Halliday, D., et al. Genes induced during the metamorphosis of Bufo marinus (Cane Toad).
Publication Pending

Wu, Y., et al. Laser Capture Microdissection and cDNA microarrays used to generate gene expression profiles of the fibre initial cells on the surface of cotton ovules.
Publication Pending

Amarasinghe, R., et al. Genomic approaches to the discovery of promoters for sustained expression in cotton (Gossypium hirsutum L.) under field conditions: expression analysis in transgenic cotton and Arabidopsis of a Rubisco small subunit promoter identified using EST sequence analysis and cDNA microarrays
Publication Pending

McFadden, H., et al. Fusarium wilt (Fusarium oxysporum f. sp. vasinfectum) genes expressed during infection of cotton (Gossypium hirsutum).
Molecular Plant Pathology. (2006) 7(2): pp87-101. DOI: 10.1111/J.1364-3703.2006.00327.X

Wu, Y., et al. Expression Profiling Identifies Genes Expressed Early During Lint Fibre Initiation in Cotton.
Plant Cell Physiol. 47(1): 107-127 (2006). doi:10.1093/pcp/pci228

Machado, A. Gene Discovery in Cotton Fibre Development.
PhD Thesis.

Wu, Y., et al. Cycloheximide treatment of cotton ovules alters the abundance of specific classes of mRNAs and generates novel ESTs for microarray expression profiling.
Mol Gen Genomics (2005) 274: pp477–493. doi:10.1007/s00438-005-0049-9.

Bower, N.I., et al. Transcriptional response of sugarcane roots to methyl jasmonate.
Plant Science, 2005, Volume 168: pp. 761-772.

Clarke, B., Rahman, S. A microarray analysis of wheat grain hardness
Theoretical and Applied Genetics, 2005, Volume 110, Number 7, pp1259 - 1267

Wilson, I.W., et al. Microarray analysis reveals vegetative molecular phenotypes of Arabidopsis flowering time mutants
Plant and Cell Physiology, 2005, Volume 46: pp1190-1201

Delessert, C. et al. The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis
Plant Journal, Volume: 43, Issue: 5, September 2005, pp. 745 - 757

Millgate, A. et al. Analgesia: morphine-pathway block in top1 poppies.
Nature. 2004 Sep 23;431(7007):413-4.

Delessert, C. et al. Spatial and temporal analysis of the local response to wounding in Arabidopsis leaves
Plant Mol Biol. 2004 May;55(2):165-81.

Dowd, C. et al. Gene Expression Profile Changes in Cotton Root and Hypocotyl Tissues in Response to Infection with Fusarium Oxysporum f sp. vasinfectum
MPMI, vol 17, no.6, pp654-667, 2004